| 1. | Aleksandr Kerzhakov
Zenit St.Petersburg | Russia | 21 | 18 |
| 2. | Andrei Karyaka
Krylia Sovetov | Russia | 26 | 17 |
| 3. | Aleksandr Panov
Torpedo Moscow | Russia | 29 | 15 |
| | Dmitri Sychev
Lokomotiv Moscow | Russia | 21 | 15 |
| 5. | Héctor Bracamonte
FC Moscow | Argentina | 26 | 11 |
| 6. | Oleksandr Spivak
Zenit St.Petersburg | Ukraine | 29 | 10 |
| | Roman Pavlyuchenko
Spartak Moscow | Russia | 22 | 10 |
| | Valery Yesipov
Rotor Volgograd | Russia | 33 | 10 |
| 9. | Dmitri Kirichenko
CSKA Moscow | Russia | 27 | 9 |
| | Igor Lebedenko
Torpedo Moscow | Russia | 21 | 9 |
| | Igor Semshov
Torpedo Moscow | Serbia | 26 | 9 |
| | Ivica Olic
CSKA Moscow | Croatia | 25 | 9 |
| | Robertas Poskus
Krylia Sovetov | Lithuania | 25 | 9 |
| | Vágner Love
CSKA Moscow | Brazil | 20 | 9 |
| 15. | Lyubomir Kantonistov
Kuban Krasnodar | Russia | 26 | 8 |
| | Pyotr Bystrov
Saturn Ramenskoye | Russia | 25 | 8 |
| 17. | Aleksandr Shirko
Shinnik Yaroslavl | Russia | 27 | 7 |
| 18. | Aleksandr Samedov
Spartak Moscow | Russia | 20 | 6 |
| | Andrey Arshavin
Zenit St.Petersburg | Russia | 23 | 6 |
| | Budun Budunov
FC Moscow | Russia | 28 | 6 |
| | Dmitri Khokhlov
Lokomotiv Moscow | Russia | 28 | 6 |
| | Igor Denisov
Zenit St.Petersburg | Russia | 20 | 6 |
| | Mihajlo Pjanovic
Spartak Moscow | Russia | 27 | 6 |
| | Nikita Bazhenov
Spartak Moscow/Saturn Ramenskoye | Russia | 19 | 6 |
| | Roni
Rubin Kazan/Krylia Sovetov | Brazil | 27 | 6 |
| | Sergei Budylin
Torpedo Moscow | Russia | 25 | 6 |
| | Yuri Zhirkov
CSKA Moscow | Russia | 21 | 6 |
