| Player, Team | League and season | Goals |
|---|---|---|
| Dion Drena Beljo Dinamo Zagreb | 31 | |
| Marko Livaja Hajduk Split | 19 | |
| Marko Dugandzic Rapid Bucuresti | 22 | |
| Marko Livaja Hajduk Split | 19 | |
| Marko Livaja Hajduk Split | 28 | |
| Petar Musa Slovan Liberec/Slavia Prague | 14 | |
| Mirko Maric Osijek | 19 | |
| Mijo Caktas Hajduk Split | 19 | |
| Mario Mandzukic Croatia | 3 | |
| Mladen Petric Basel | 19 | |
| Davor Suker Croatia | 6 |
